Package index

All functions

aurora_GWAS()

Function that run GWAS analysis

aurora_pheno()

Main function of the aurora package. This function determines if the analysed species is adapted to the investigated phenotype and it also identifies mislabeled strains. The output of this function can be used as an input into aurora_GWAS function.

get_bags()

Functions that uses random walk or phylogenetic walk to obtain training datasets

setup_conda()

Function sets up conda environment for aurora